miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|125445283|gb|EL456979.1|EL456979 GTATAGTAATAATACCTCTAGATTTCATTTTGTTGCAGCGGGTTGAAGCTTCCAAAGGGATCGCATTGATCCATCTGTCC
ACTCGGATTTCAATCTCAGTTGATAATTTGGATCATGCGATCTCTTCGGAAGCTTCCTCCATCGCGCTGCATGTTTACAT
CAATCCATCCATCTTCAACTCATTCAAAGGACACCCCTGAACAAGTGCGAGGACACCCCTCAAGCTATGAAAAAAAAAGA
AGAGGACAAATCTATTAGGCGAATGCGGCTTCTGGAATGCATGTTCATGATGACTGTAAGTTAAAGTTTTTAGAGTTAAA
AGCCAAACGAAACTACCGATTTGTTACCTTCAAGATTGAGGACCAACAAGTGAGGGTTGACAAGATCGGTGGCCCTAACG
AAAGCTACGAGGATTTCACAAACTCACTCCCTAATAATGAATGTCGTTATGCCGTTTTTGACTTCGACTTCACAACCGAT
GAAAATGTTCAGAAAAGCAAGATTTTCTTCATTGCATGGTCACCAGATACATCAAAAGTGAGAATGAAGATGGTATACGC
GAGTTCAAAAGACAGATTCAAGAGAGAACTCGACGGGATCCAAGTCGAGTTGCAAGCAACAGATCCTACTGAGATGAGCT
TTGACATTATAAAATCAAGAGCGATTTAATCAATAAGAATGAACCATTATTTATGCCATATTTTTAACCTTTAATTAAAT
TTATGGTCAATTTTCTATAAGAAATAGTGTAATGCAACAGTACTATGCCTTTATTGTTACATTTATAATCAATTTGTACA




Most similar to sp|Q67ZM4|ADF7_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q67ZM4|ADF7_ARATH Actin-depolymerizing factor 7 OS=Arabidopsis
           thaliana GN=ADF7 PE=2 SV=1
          Length = 137

 Score =  233 bits (593), Expect = 2e-60
 Identities = 112/136 (82%), Positives = 126/136 (92%)
 Frame = +1

Query: 259 ANAASGMHVHDDCKLKFLELKAKRNYRFVTFKIEDQQVRVDKIGGPNESYEDFTNSLPNN 438
           ANAASGM V D+CKLKFLELK+KRNYRF+ F+I+ QQV V+K+G P+E+Y+DFT SLP N
Sbjct: 2   ANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPAN 61

Query: 439 ECRYAVFDFDFTTDENVQKSKIFFIAWSPDTSKVRMKMVYASSKDRFKRELDGIQVELQA 618
           ECRYAVFDFDF TDEN QKSKIFFIAWSPD+S+VRMKMVYASSKDRFKRELDGIQVELQA
Sbjct: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121

Query: 619 TDPTEMSFDIIKSRAI 666
           TDP+EMSFDIIKSRA+
Sbjct: 122 TDPSEMSFDIIKSRAL 137